WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25H3.11a.1 Sequence Name  C25H3.11a.1
Length (nt)  10412   Chromosome Location  II: 5669773-5689030
Chromosome . Primary Identifier  II Chromosome Location . Start  5669773
Chromosome Location . End  5689030 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25H3.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016120 vps-13D C25H3.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25H3.11a C25H3.11a 9945   II: 5670163-5670350

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25H3.11a.1 5669773 5689030 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51089   578   II: 5669773-5670350 Caenorhabditis elegans
Exon51091   100   II: 5670406-5670505 Caenorhabditis elegans
Exon51095   229   II: 5670554-5670782 Caenorhabditis elegans
Exon51099   709   II: 5670843-5671551 Caenorhabditis elegans
Exon51103   558   II: 5671597-5672154 Caenorhabditis elegans
Exon51107   1072   II: 5672204-5673275 Caenorhabditis elegans
Exon51113   1025   II: 5673326-5674350 Caenorhabditis elegans
Exon51115   735   II: 5674397-5675131 Caenorhabditis elegans
Exon51119   105   II: 5675178-5675282 Caenorhabditis elegans
Exon51123   145   II: 5675332-5675476 Caenorhabditis elegans
Exon51127   30   II: 5675684-5675713 Caenorhabditis elegans
Exon51129   449   II: 5675783-5676231 Caenorhabditis elegans
Exon51133   191   II: 5676282-5676472 Caenorhabditis elegans
Exon51137   1201   II: 5677043-5678243 Caenorhabditis elegans
Exon51142   376   II: 5678925-5679300 Caenorhabditis elegans
Exon51150   167   II: 5684491-5684657 Caenorhabditis elegans
Exon51154   238   II: 5685022-5685259 Caenorhabditis elegans
Exon51158   1453   II: 5685308-5686760 Caenorhabditis elegans
Exon51162   509   II: 5687062-5687570 Caenorhabditis elegans
Exon51166   368   II: 5688245-5688612 Caenorhabditis elegans
Exon51171   109   II: 5688808-5688916 Caenorhabditis elegans
Exon51174   65   II: 5688966-5689030 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25H3.11a.1 5669773 5689030 -1

1 Sequence

Length
10412

1 Sequence Ontology Term

Identifier Name Description
transcript