WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25H3.11b.1 Sequence Name  C25H3.11b.1
Length (nt)  10329   Chromosome Location  II: 5669773-5688904
Chromosome . Primary Identifier  II Chromosome Location . Start  5669773
Chromosome Location . End  5688904 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25H3.11b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016120 vps-13D C25H3.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25H3.11b C25H3.11b 9939   II: 5670163-5670350

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25H3.11b.1 5669773 5688904 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51088   578   II: 5669773-5670350 Caenorhabditis elegans
Exon51092   100   II: 5670406-5670505 Caenorhabditis elegans
Exon51096   229   II: 5670554-5670782 Caenorhabditis elegans
Exon51100   709   II: 5670843-5671551 Caenorhabditis elegans
Exon51104   558   II: 5671597-5672154 Caenorhabditis elegans
Exon51108   1072   II: 5672204-5673275 Caenorhabditis elegans
Exon51111   1019   II: 5673326-5674344 Caenorhabditis elegans
Exon51116   735   II: 5674397-5675131 Caenorhabditis elegans
Exon51120   105   II: 5675178-5675282 Caenorhabditis elegans
Exon51124   145   II: 5675332-5675476 Caenorhabditis elegans
Exon51128   30   II: 5675684-5675713 Caenorhabditis elegans
Exon51130   449   II: 5675783-5676231 Caenorhabditis elegans
Exon51134   191   II: 5676282-5676472 Caenorhabditis elegans
Exon51138   1201   II: 5677043-5678243 Caenorhabditis elegans
Exon51143   376   II: 5678925-5679300 Caenorhabditis elegans
Exon51151   167   II: 5684491-5684657 Caenorhabditis elegans
Exon51155   238   II: 5685022-5685259 Caenorhabditis elegans
Exon51159   1453   II: 5685308-5686760 Caenorhabditis elegans
Exon51163   509   II: 5687062-5687570 Caenorhabditis elegans
Exon51167   368   II: 5688245-5688612 Caenorhabditis elegans
Exon51170   97   II: 5688808-5688904 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25H3.11b.1 5669773 5688904 -1

1 Sequence

Length
10329

1 Sequence Ontology Term

Identifier Name Description
transcript