WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17C3.12a.1 Sequence Name  C17C3.12a.1
Length (nt)  1500   Chromosome Location  II: 5544781-5547490
Chromosome . Primary Identifier  II Chromosome Location . Start  5544781
Chromosome Location . End  5547490 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17C3.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015894 acdh-2 C17C3.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17C3.12a C17C3.12a 927   II: 5545720-5545865

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C17C3.12a.1 5544781 5547490 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50612   434   II: 5544781-5545214 Caenorhabditis elegans
Exon50621   138   II: 5545266-5545403 Caenorhabditis elegans
Exon50631   146   II: 5545720-5545865 Caenorhabditis elegans
Exon50638   97   II: 5546430-5546526 Caenorhabditis elegans
Exon50652   237   II: 5546573-5546809 Caenorhabditis elegans
Exon50666   308   II: 5546990-5547297 Caenorhabditis elegans
Exon50681   140   II: 5547351-5547490 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C17C3.12a.1 5544781 5547490 -1

1 Sequence

Length
1500

1 Sequence Ontology Term

Identifier Name Description
transcript