WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F12A10.4.1 Sequence Name  F12A10.4.1
Length (nt)  2124   Chromosome Location  II: 5488144-5490638
Chromosome . Primary Identifier  II Chromosome Location . Start  5488144
Chromosome Location . End  5490638 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F12A10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017393 nep-5 F12A10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F12A10.4 F12A10.4 2085   II: 5488151-5488200

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F12A10.4.1 5488144 5490638 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50378   57   II: 5488144-5488200 Caenorhabditis elegans
Exon50379   310   II: 5488248-5488557 Caenorhabditis elegans
Exon50380   218   II: 5488602-5488819 Caenorhabditis elegans
Exon50381   373   II: 5488870-5489242 Caenorhabditis elegans
Exon50382   159   II: 5489292-5489450 Caenorhabditis elegans
Exon50383   499   II: 5489496-5489994 Caenorhabditis elegans
Exon50384   218   II: 5490040-5490257 Caenorhabditis elegans
Exon50386   129   II: 5490303-5490431 Caenorhabditis elegans
Exon50387   161   II: 5490478-5490638 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F12A10.4.1 5488144 5490638 1

1 Sequence

Length
2124

1 Sequence Ontology Term

Identifier Name Description
transcript