WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D1.4a.1 Sequence Name  F56D1.4a.1
Length (nt)  4776   Chromosome Location  II: 5466359-5473816
Chromosome . Primary Identifier  II Chromosome Location . Start  5466359
Chromosome Location . End  5473816 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000548 clr-1 F56D1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D1.4a F56D1.4a 4230   II: 5466474-5466547

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F56D1.4a.1 5466359 5473816 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50257   189   II: 5466359-5466547 Caenorhabditis elegans
Exon50261   104   II: 5466595-5466698 Caenorhabditis elegans
Exon50266   105   II: 5467003-5467107 Caenorhabditis elegans
Exon50271   107   II: 5467155-5467261 Caenorhabditis elegans
Exon50276   103   II: 5467613-5467715 Caenorhabditis elegans
Exon50281   333   II: 5467899-5468231 Caenorhabditis elegans
Exon50287   100   II: 5468884-5468983 Caenorhabditis elegans
Exon50294   173   II: 5469389-5469561 Caenorhabditis elegans
Exon50299   302   II: 5469612-5469913 Caenorhabditis elegans
Exon50304   200   II: 5469960-5470159 Caenorhabditis elegans
Exon50309   384   II: 5470217-5470600 Caenorhabditis elegans
Exon50314   747   II: 5470835-5471581 Caenorhabditis elegans
Exon50320   96   II: 5471629-5471724 Caenorhabditis elegans
Exon50324   74   II: 5471778-5471851 Caenorhabditis elegans
Exon50329   139   II: 5471916-5472054 Caenorhabditis elegans
Exon50334   691   II: 5472100-5472790 Caenorhabditis elegans
Exon50339   302   II: 5472839-5473140 Caenorhabditis elegans
Exon50348   627   II: 5473190-5473816 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F56D1.4a.1 5466359 5473816 1

1 Sequence

Length
4776

1 Sequence Ontology Term

Identifier Name Description
transcript