WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E5.1.1 Sequence Name  F09E5.1.1
Length (nt)  2332   Chromosome Location  II: 5380027-5384169
Chromosome . Primary Identifier  II Chromosome Location . Start  5380027
Chromosome Location . End  5384169 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004034 pkc-3 F09E5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E5.1 F09E5.1 1794   II: 5380028-5380093

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F09E5.1.1 5380027 5384169 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50049   67   II: 5380027-5380093 Caenorhabditis elegans
Exon50050   259   II: 5380501-5380759 Caenorhabditis elegans
Exon50051   85   II: 5381037-5381121 Caenorhabditis elegans
Exon50052   127   II: 5381171-5381297 Caenorhabditis elegans
Exon50053   177   II: 5381460-5381636 Caenorhabditis elegans
Exon50054   252   II: 5382308-5382559 Caenorhabditis elegans
Exon50055   359   II: 5382644-5383002 Caenorhabditis elegans
Exon50056   343   II: 5383049-5383391 Caenorhabditis elegans
Exon50057   663   II: 5383507-5384169 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F09E5.1.1 5380027 5384169 1

1 Sequence

Length
2332

1 Sequence Ontology Term

Identifier Name Description
transcript