WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B1.1a.1 Sequence Name  F08B1.1a.1
Length (nt)  2559   Chromosome Location  II: 5331486-5340829
Chromosome . Primary Identifier  II Chromosome Location . Start  5331486
Chromosome Location . End  5340829 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006923 vhp-1 F08B1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B1.1a F08B1.1a 1974   II: 5331489-5331671

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08B1.1a.1 5331486 5340829 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49894   186   II: 5331486-5331671 Caenorhabditis elegans
Exon49895   122   II: 5334528-5334649 Caenorhabditis elegans
Exon49899   104   II: 5334698-5334801 Caenorhabditis elegans
Exon49905   185   II: 5338172-5338356 Caenorhabditis elegans
Exon49912   275   II: 5338740-5339014 Caenorhabditis elegans
Exon49920   892   II: 5339075-5339966 Caenorhabditis elegans
Exon49934   795   II: 5340035-5340829 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08B1.1a.1 5331486 5340829 1

1 Sequence

Length
2559

1 Sequence Ontology Term

Identifier Name Description
transcript