WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B1.2a.1 Sequence Name  F08B1.2a.1
Length (nt)  5648   Chromosome Location  II: 5312046-5319617
Chromosome . Primary Identifier  II Chromosome Location . Start  5312046
Chromosome Location . End  5319617 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B1.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001538 gcy-12 F08B1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B1.2a F08B1.2a 5040   II: 5312120-5312338

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08B1.2a.1 5312046 5319617 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49857   293   II: 5312046-5312338 Caenorhabditis elegans
Exon49859   313   II: 5312390-5312702 Caenorhabditis elegans
Exon49861   151   II: 5313113-5313263 Caenorhabditis elegans
Exon49863   308   II: 5313330-5313637 Caenorhabditis elegans
Exon49865   156   II: 5313683-5313838 Caenorhabditis elegans
Exon49867   194   II: 5313887-5314080 Caenorhabditis elegans
Exon49869   154   II: 5314125-5314278 Caenorhabditis elegans
Exon49871   361   II: 5314701-5315061 Caenorhabditis elegans
Exon49873   1726   II: 5315108-5316833 Caenorhabditis elegans
Exon49875   133   II: 5316879-5317011 Caenorhabditis elegans
Exon49878   247   II: 5317469-5317715 Caenorhabditis elegans
Exon49879   345   II: 5317770-5318114 Caenorhabditis elegans
Exon49881   202   II: 5318189-5318390 Caenorhabditis elegans
Exon49883   206   II: 5318444-5318649 Caenorhabditis elegans
Exon49885   197   II: 5318706-5318902 Caenorhabditis elegans
Exon49888   662   II: 5318956-5319617 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08B1.2a.1 5312046 5319617 1

1 Sequence

Length
5648

1 Sequence Ontology Term

Identifier Name Description
transcript