WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54A12.2a.1 Sequence Name  C54A12.2a.1
Length (nt)  987   Chromosome Location  II: 5253245-5255529
Chromosome . Primary Identifier  II Chromosome Location . Start  5253245
Chromosome Location . End  5255529 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54A12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016909 frpr-4 C54A12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54A12.2a C54A12.2a 987   II: 5253245-5253320

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54A12.2a.1 5253245 5255529 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49760   76   II: 5253245-5253320 Caenorhabditis elegans
Exon49762   125   II: 5253436-5253560 Caenorhabditis elegans
Exon49765   429   II: 5253606-5254034 Caenorhabditis elegans
Exon49768   142   II: 5254309-5254450 Caenorhabditis elegans
Exon49771   92   II: 5254701-5254792 Caenorhabditis elegans
Exon49774   123   II: 5255407-5255529 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54A12.2a.1 5253245 5255529 -1

1 Sequence

Length
987

1 Sequence Ontology Term

Identifier Name Description
transcript