WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54A12.2c.1 Sequence Name  C54A12.2c.1
Length (nt)  1239   Chromosome Location  II: 5250920-5255535
Chromosome . Primary Identifier  II Chromosome Location . Start  5250920
Chromosome Location . End  5255535 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54A12.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016909 frpr-4 C54A12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54A12.2c C54A12.2c 1032   II: 5251121-5251241

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54A12.2c.1 5250920 5255535 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49758   322   II: 5250920-5251241 Caenorhabditis elegans
Exon49764   125   II: 5253436-5253560 Caenorhabditis elegans
Exon49767   429   II: 5253606-5254034 Caenorhabditis elegans
Exon49770   142   II: 5254309-5254450 Caenorhabditis elegans
Exon49773   92   II: 5254701-5254792 Caenorhabditis elegans
Exon49776   129   II: 5255407-5255535 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54A12.2c.1 5250920 5255535 -1

1 Sequence

Length
1239

1 Sequence Ontology Term

Identifier Name Description
transcript