WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54A12.1.1 Sequence Name  C54A12.1.1
Length (nt)  3075   Chromosome Location  II: 5242442-5246837
Chromosome . Primary Identifier  II Chromosome Location . Start  5242442
Chromosome Location . End  5246837 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54A12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004221 ptr-6 C54A12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54A12.1 C54A12.1 2949   II: 5242566-5242840

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54A12.1.1 5242442 5246837 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49744   399   II: 5242442-5242840 Caenorhabditis elegans
Exon49745   186   II: 5242890-5243075 Caenorhabditis elegans
Exon49746   213   II: 5243122-5243334 Caenorhabditis elegans
Exon49747   267   II: 5243478-5243744 Caenorhabditis elegans
Exon49748   296   II: 5243789-5244084 Caenorhabditis elegans
Exon49749   242   II: 5244247-5244488 Caenorhabditis elegans
Exon49750   332   II: 5244537-5244868 Caenorhabditis elegans
Exon49751   74   II: 5245090-5245163 Caenorhabditis elegans
Exon49752   465   II: 5245208-5245672 Caenorhabditis elegans
Exon49753   86   II: 5245823-5245908 Caenorhabditis elegans
Exon49754   282   II: 5245963-5246244 Caenorhabditis elegans
Exon49755   144   II: 5246558-5246701 Caenorhabditis elegans
Exon49756   89   II: 5246749-5246837 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54A12.1.1 5242442 5246837 -1

1 Sequence

Length
3075

1 Sequence Ontology Term

Identifier Name Description
transcript