WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16D1.2.1 Sequence Name  T16D1.2.1
Length (nt)  1418   Chromosome Location  II: 5236257-5238466
Chromosome . Primary Identifier  II Chromosome Location . Start  5236257
Chromosome Location . End  5238466 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16D1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004023 pho-4 T16D1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16D1.2 T16D1.2 1359   II: 5236310-5236408

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T16D1.2.1 5236257 5238466 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49730   152   II: 5236257-5236408 Caenorhabditis elegans
Exon49731   95   II: 5236453-5236547 Caenorhabditis elegans
Exon49732   52   II: 5236634-5236685 Caenorhabditis elegans
Exon49733   141   II: 5236740-5236880 Caenorhabditis elegans
Exon49734   167   II: 5237118-5237284 Caenorhabditis elegans
Exon49735   310   II: 5237379-5237688 Caenorhabditis elegans
Exon49736   83   II: 5237743-5237825 Caenorhabditis elegans
Exon49738   205   II: 5237963-5238167 Caenorhabditis elegans
Exon49739   105   II: 5238211-5238315 Caenorhabditis elegans
Exon49740   108   II: 5238359-5238466 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T16D1.2.1 5236257 5238466 -1

1 Sequence

Length
1418

1 Sequence Ontology Term

Identifier Name Description
transcript