WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09C12.1a.1 Sequence Name  F09C12.1a.1
Length (nt)  1598   Chromosome Location  II: 5130381-5133472
Chromosome . Primary Identifier  II Chromosome Location . Start  5130381
Chromosome Location . End  5133472 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09C12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001588 lgc-56 F09C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09C12.1a F09C12.1a 1338   II: 5130384-5130506

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F09C12.1a.1 5130381 5133472 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49379   126   II: 5130381-5130506 Caenorhabditis elegans
Exon49380   78   II: 5130612-5130689 Caenorhabditis elegans
Exon49382   89   II: 5130938-5131026 Caenorhabditis elegans
Exon49384   146   II: 5131072-5131217 Caenorhabditis elegans
Exon49386   277   II: 5131266-5131542 Caenorhabditis elegans
Exon49388   199   II: 5131879-5132077 Caenorhabditis elegans
Exon49390   155   II: 5132122-5132276 Caenorhabditis elegans
Exon49392   102   II: 5132327-5132428 Caenorhabditis elegans
Exon49394   128   II: 5132920-5133047 Caenorhabditis elegans
Exon49397   298   II: 5133175-5133472 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F09C12.1a.1 5130381 5133472 1

1 Sequence

Length
1598

1 Sequence Ontology Term

Identifier Name Description
transcript