WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04G6.1c.1 Sequence Name  C04G6.1c.1
Length (nt)  1963   Chromosome Location  II: 5104118-5108899
Chromosome . Primary Identifier  II Chromosome Location . Start  5104118
Chromosome Location . End  5108899 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04G6.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003402 mpk-2 C04G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04G6.1c C04G6.1c 1713   II: 5104646-5104771

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04G6.1c.1 5104118 5108899 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49306   154   II: 5104118-5104271 Caenorhabditis elegans
Exon49312   132   II: 5104640-5104771 Caenorhabditis elegans
Exon49315   282   II: 5104828-5105109 Caenorhabditis elegans
Exon49320   159   II: 5105411-5105569 Caenorhabditis elegans
Exon49324   68   II: 5105617-5105684 Caenorhabditis elegans
Exon49328   253   II: 5106095-5106347 Caenorhabditis elegans
Exon49332   107   II: 5106397-5106503 Caenorhabditis elegans
Exon49335   114   II: 5106812-5106925 Caenorhabditis elegans
Exon49339   125   II: 5107616-5107740 Caenorhabditis elegans
Exon49342   244   II: 5107789-5108032 Caenorhabditis elegans
Exon49345   130   II: 5108527-5108656 Caenorhabditis elegans
Exon49348   195   II: 5108705-5108899 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04G6.1c.1 5104118 5108899 1

1 Sequence

Length
1963

1 Sequence Ontology Term

Identifier Name Description
transcript