WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27F7.2a.1 Sequence Name  T27F7.2a.1
Length (nt)  2380   Chromosome Location  II: 4972507-4988940
Chromosome . Primary Identifier  II Chromosome Location . Start  4972507
Chromosome Location . End  4988940 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27F7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020867 shc-2 T27F7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27F7.2a T27F7.2a 1917   II: 4972757-4972785

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27F7.2a.1 4972507 4988940 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48984   279   II: 4972507-4972785 Caenorhabditis elegans
Exon48986   105   II: 4972855-4972959 Caenorhabditis elegans
Exon48988   340   II: 4973692-4974031 Caenorhabditis elegans
Exon48992   144   II: 4975678-4975821 Caenorhabditis elegans
Exon48996   147   II: 4978397-4978543 Caenorhabditis elegans
Exon48999   90   II: 4983479-4983568 Caenorhabditis elegans
Exon49003   122   II: 4985073-4985194 Caenorhabditis elegans
Exon49008   82   II: 4986117-4986198 Caenorhabditis elegans
Exon49013   326   II: 4987042-4987367 Caenorhabditis elegans
Exon49018   172   II: 4987622-4987793 Caenorhabditis elegans
Exon49023   192   II: 4987845-4988036 Caenorhabditis elegans
Exon49030   381   II: 4988560-4988940 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27F7.2a.1 4972507 4988940 1

1 Sequence

Length
2380

1 Sequence Ontology Term

Identifier Name Description
transcript