WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38A8.2.1 Sequence Name  Y38A8.2.1
Length (nt)  848   Chromosome Location  II: 4954480-4955427
Chromosome . Primary Identifier  II Chromosome Location . Start  4954480
Chromosome Location . End  4955427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38A8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003949 pbs-3 Y38A8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38A8.2 Y38A8.2 615   II: 4954673-4954836

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38A8.2.1 4954480 4955427 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48944   357   II: 4954480-4954836 Caenorhabditis elegans
Exon48945   398   II: 4954886-4955283 Caenorhabditis elegans
Exon48946   93   II: 4955335-4955427 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38A8.2.1 4954480 4955427 -1

1 Sequence

Length
848

1 Sequence Ontology Term

Identifier Name Description
transcript