WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38A8.1.1 Sequence Name  Y38A8.1.1
Length (nt)  816   Chromosome Location  II: 4953589-4954503
Chromosome . Primary Identifier  II Chromosome Location . Start  4953589
Chromosome Location . End  4954503 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38A8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003580 ndx-3 Y38A8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38A8.1 Y38A8.1 723   II: 4953595-4953684

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38A8.1.1 4953589 4954503 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48941   96   II: 4953589-4953684 Caenorhabditis elegans
Exon48942   495   II: 4953740-4954234 Caenorhabditis elegans
Exon48943   225   II: 4954279-4954503 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38A8.1.1 4953589 4954503 1

1 Sequence

Length
816

1 Sequence Ontology Term

Identifier Name Description
transcript