WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK546.1a.3 Sequence Name  ZK546.1a.3
Length (nt)  2941   Chromosome Location  II: 4949900-4953478
Chromosome . Primary Identifier  II Chromosome Location . Start  4949900
Chromosome Location . End  4953478 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK546.1a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006997 zyg-12 ZK546.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK546.1a ZK546.1a 2211   II: 4949911-4950069

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK546.1a.3 4949900 4953478 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48870   170   II: 4949900-4950069 Caenorhabditis elegans
Exon48880   89   II: 4950118-4950206 Caenorhabditis elegans
Exon48888   1181   II: 4950257-4951437 Caenorhabditis elegans
Exon48896   64   II: 4951484-4951547 Caenorhabditis elegans
Exon48904   418   II: 4951592-4952009 Caenorhabditis elegans
Exon48912   180   II: 4952060-4952239 Caenorhabditis elegans
Exon48920   110   II: 4952283-4952392 Caenorhabditis elegans
Exon48928   42   II: 4952490-4952531 Caenorhabditis elegans
Exon48932   48   II: 4952647-4952694 Caenorhabditis elegans
Exon48934   639   II: 4952840-4953478 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK546.1a.3 4949900 4953478 1

1 Sequence

Length
2941

1 Sequence Ontology Term

Identifier Name Description
transcript