WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05F9.11.1 Sequence Name  R05F9.11.1
Length (nt)  1678   Chromosome Location  II: 4911771-4914218
Chromosome . Primary Identifier  II Chromosome Location . Start  4911771
Chromosome Location . End  4914218 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05F9.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019894 snpc-1.4 R05F9.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05F9.11 R05F9.11 1578   II: 4911868-4911974

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R05F9.11.1 4911771 4914218 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48786   204   II: 4911771-4911974 Caenorhabditis elegans
Exon48787   169   II: 4912020-4912188 Caenorhabditis elegans
Exon48788   318   II: 4912232-4912549 Caenorhabditis elegans
Exon48789   249   II: 4912791-4913039 Caenorhabditis elegans
Exon48790   261   II: 4913338-4913598 Caenorhabditis elegans
Exon48791   288   II: 4913649-4913936 Caenorhabditis elegans
Exon48792   85   II: 4913985-4914069 Caenorhabditis elegans
Exon48793   104   II: 4914115-4914218 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R05F9.11.1 4911771 4914218 -1

1 Sequence

Length
1678

1 Sequence Ontology Term

Identifier Name Description
transcript