WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10G7.8.1 Sequence Name  F10G7.8.1
Length (nt)  1652   Chromosome Location  II: 4696421-4698294
Chromosome . Primary Identifier  II Chromosome Location . Start  4696421
Chromosome Location . End  4698294 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10G7.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004461 rpn-5 F10G7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G7.8 F10G7.8 1473   II: 4696598-4696909

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F10G7.8.1 4696421 4698294 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48329   489   II: 4696421-4696909 Caenorhabditis elegans
Exon48330   177   II: 4696977-4697153 Caenorhabditis elegans
Exon48332   708   II: 4697201-4697908 Caenorhabditis elegans
Exon48334   186   II: 4697960-4698145 Caenorhabditis elegans
Exon48336   92   II: 4698203-4698294 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F10G7.8.1 4696421 4698294 -1

1 Sequence

Length
1652

1 Sequence Ontology Term

Identifier Name Description
transcript