WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y52E8A.6.1 Sequence Name  Y52E8A.6.1
Length (nt)  1407   Chromosome Location  II: 4316629-4319969
Chromosome . Primary Identifier  II Chromosome Location . Start  4316629
Chromosome Location . End  4319969 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52E8A.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021798 Y52E8A.6 Y52E8A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y52E8A.6 Y52E8A.6 1311   II: 4316799-4316969

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y52E8A.6.1 4316629 4319969 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47387   11   II: 4316629-4316639 Caenorhabditis elegans
Exon47388   256   II: 4316714-4316969 Caenorhabditis elegans
Exon47389   136   II: 4317221-4317356 Caenorhabditis elegans
Exon47390   271   II: 4317407-4317677 Caenorhabditis elegans
Exon47391   90   II: 4317751-4317840 Caenorhabditis elegans
Exon47394   124   II: 4319140-4319263 Caenorhabditis elegans
Exon47395   76   II: 4319312-4319387 Caenorhabditis elegans
Exon47396   97   II: 4319432-4319528 Caenorhabditis elegans
Exon47397   188   II: 4319575-4319762 Caenorhabditis elegans
Exon47398   158   II: 4319812-4319969 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y52E8A.6.1 4316629 4319969 -1

1 Sequence

Length
1407

1 Sequence Ontology Term

Identifier Name Description
transcript