WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y52E8A.4a.1 Sequence Name  Y52E8A.4a.1
Length (nt)  1461   Chromosome Location  II: 4309635-4312215
Chromosome . Primary Identifier  II Chromosome Location . Start  4309635
Chromosome Location . End  4312215 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52E8A.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021797 plep-1 Y52E8A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y52E8A.4a Y52E8A.4a 1371   II: 4309725-4309804

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y52E8A.4a.1 4309635 4312215 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47364   170   II: 4309635-4309804 Caenorhabditis elegans
Exon47366   145   II: 4309848-4309992 Caenorhabditis elegans
Exon47368   136   II: 4310059-4310194 Caenorhabditis elegans
Exon47370   274   II: 4310248-4310521 Caenorhabditis elegans
Exon47372   90   II: 4310619-4310708 Caenorhabditis elegans
Exon47374   121   II: 4310758-4310878 Caenorhabditis elegans
Exon47376   173   II: 4310922-4311094 Caenorhabditis elegans
Exon47379   70   II: 4311436-4311505 Caenorhabditis elegans
Exon47380   282   II: 4311934-4312215 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y52E8A.4a.1 4309635 4312215 -1

1 Sequence

Length
1461

1 Sequence Ontology Term

Identifier Name Description
transcript