WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16A11.1a.1 Sequence Name  C16A11.1a.1
Length (nt)  1823   Chromosome Location  II: 4247208-4255577
Chromosome . Primary Identifier  II Chromosome Location . Start  4247208
Chromosome Location . End  4255577 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16A11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001673 gpa-11 C16A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16A11.1a C16A11.1a 1092   II: 4253052-4253503

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C16A11.1a.1 4247208 4255577 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47300   127   II: 4247208-4247334 Caenorhabditis elegans
Exon47301   99   II: 4248310-4248408 Caenorhabditis elegans
Exon47304   102   II: 4251369-4251470 Caenorhabditis elegans
Exon47306   134   II: 4252731-4252864 Caenorhabditis elegans
Exon47309   477   II: 4253027-4253503 Caenorhabditis elegans
Exon47312   129   II: 4254220-4254348 Caenorhabditis elegans
Exon47315   43   II: 4254464-4254506 Caenorhabditis elegans
Exon47320   598   II: 4254814-4255411 Caenorhabditis elegans
Exon47322   114   II: 4255464-4255577 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C16A11.1a.1 4247208 4255577 1

1 Sequence

Length
1823

1 Sequence Ontology Term

Identifier Name Description
transcript