WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16A11.5e.1 Sequence Name  C16A11.5e.1
Length (nt)  1860   Chromosome Location  II: 4223314-4226253
Chromosome . Primary Identifier  II Chromosome Location . Start  4223314
Chromosome Location . End  4226253 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16A11.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015818 C16A11.5 C16A11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16A11.5e C16A11.5e 1860   II: 4223314-4223418

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16A11.5e.1 4223314 4226253 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47098   105   II: 4223314-4223418 Caenorhabditis elegans
Exon47113   109   II: 4223480-4223588 Caenorhabditis elegans
Exon47119   35   II: 4223652-4223686 Caenorhabditis elegans
Exon47139   105   II: 4223804-4223908 Caenorhabditis elegans
Exon47154   165   II: 4223967-4224131 Caenorhabditis elegans
Exon47159   87   II: 4224190-4224276 Caenorhabditis elegans
Exon47171   159   II: 4224280-4224438 Caenorhabditis elegans
Exon47195   324   II: 4224957-4225280 Caenorhabditis elegans
Exon47210   353   II: 4225327-4225679 Caenorhabditis elegans
Exon47225   105   II: 4225730-4225834 Caenorhabditis elegans
Exon47240   75   II: 4225890-4225964 Caenorhabditis elegans
Exon47241   238   II: 4226016-4226253 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16A11.5e.1 4223314 4226253 1

1 Sequence

Length
1860

1 Sequence Ontology Term

Identifier Name Description
transcript