WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16A11.5a.2 Sequence Name  C16A11.5a.2
Length (nt)  2066   Chromosome Location  II: 4223305-4226330
Chromosome . Primary Identifier  II Chromosome Location . Start  4223305
Chromosome Location . End  4226330 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16A11.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015818 C16A11.5 C16A11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16A11.5a C16A11.5a 1239   II: 4224295-4224438

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C16A11.5a.2 4223305 4226330 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47088   114   II: 4223305-4223418 Caenorhabditis elegans
Exon47100   109   II: 4223480-4223588 Caenorhabditis elegans
Exon47125   257   II: 4223652-4223908 Caenorhabditis elegans
Exon47141   165   II: 4223967-4224131 Caenorhabditis elegans
Exon47162   249   II: 4224190-4224438 Caenorhabditis elegans
Exon47182   324   II: 4224957-4225280 Caenorhabditis elegans
Exon47197   353   II: 4225327-4225679 Caenorhabditis elegans
Exon47212   105   II: 4225730-4225834 Caenorhabditis elegans
Exon47227   75   II: 4225890-4225964 Caenorhabditis elegans
Exon47244   315   II: 4226016-4226330 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C16A11.5a.2 4223305 4226330 1

1 Sequence

Length
2066

1 Sequence Ontology Term

Identifier Name Description
transcript