WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31D5.3a.1 Sequence Name  F31D5.3a.1
Length (nt)  3518   Chromosome Location  II: 4186666-4208498
Chromosome . Primary Identifier  II Chromosome Location . Start  4186666
Chromosome Location . End  4208498 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31D5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006495 cpna-1 F31D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31D5.3a F31D5.3a 3276   II: 4186676-4186930

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31D5.3a.1 4186666 4208498 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46994   265   II: 4186666-4186930 Caenorhabditis elegans
Exon46996   152   II: 4186972-4187123 Caenorhabditis elegans
Exon46999   681   II: 4187468-4188148 Caenorhabditis elegans
Exon47002   189   II: 4188210-4188398 Caenorhabditis elegans
Exon47005   66   II: 4188901-4188966 Caenorhabditis elegans
Exon47044   920   II: 4204831-4205750 Caenorhabditis elegans
Exon47046   38   II: 4206002-4206039 Caenorhabditis elegans
Exon47049   603   II: 4206643-4207245 Caenorhabditis elegans
Exon47051   138   II: 4207294-4207431 Caenorhabditis elegans
Exon47053   146   II: 4207892-4208037 Caenorhabditis elegans
Exon47055   320   II: 4208179-4208498 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31D5.3a.1 4186666 4208498 1

1 Sequence

Length
3518

1 Sequence Ontology Term

Identifier Name Description
transcript