WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08H4.1a.2 Sequence Name  T08H4.1a.2
Length (nt)  3420   Chromosome Location  II: 4109210-4127849
Chromosome . Primary Identifier  II Chromosome Location . Start  4109210
Chromosome Location . End  4127849 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08H4.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006476 rhgf-2 T08H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08H4.1a T08H4.1a 2589   II: 4120337-4120387

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T08H4.1a.2 4109210 4127849 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46828   166   II: 4109210-4109375 Caenorhabditis elegans
Exon46831   142   II: 4111906-4112047 Caenorhabditis elegans
Exon46839   123   II: 4112482-4112604 Caenorhabditis elegans
Exon46849   131   II: 4120257-4120387 Caenorhabditis elegans
Exon46857   80   II: 4121113-4121192 Caenorhabditis elegans
Exon46866   378   II: 4121965-4122342 Caenorhabditis elegans
Exon46875   268   II: 4122395-4122662 Caenorhabditis elegans
Exon46884   96   II: 4122733-4122828 Caenorhabditis elegans
Exon46893   784   II: 4123244-4124027 Caenorhabditis elegans
Exon46902   647   II: 4124421-4125067 Caenorhabditis elegans
Exon46911   108   II: 4125112-4125219 Caenorhabditis elegans
Exon46920   167   II: 4125277-4125443 Caenorhabditis elegans
Exon46933   330   II: 4127520-4127849 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T08H4.1a.2 4109210 4127849 1

1 Sequence

Length
3420

1 Sequence Ontology Term

Identifier Name Description
transcript