WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53C3.6a.1 Sequence Name  F53C3.6a.1
Length (nt)  1897   Chromosome Location  II: 3898142-3900953
Chromosome . Primary Identifier  II Chromosome Location . Start  3898142
Chromosome Location . End  3900953 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53C3.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018750 F53C3.6 F53C3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53C3.6a F53C3.6a 753   II: 3898161-3898372

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53C3.6a.1 3898142 3900953 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46367   231   II: 3898142-3898372 Caenorhabditis elegans
Exon46369   129   II: 3898418-3898546 Caenorhabditis elegans
Exon46370   106   II: 3899015-3899120 Caenorhabditis elegans
Exon46372   110   II: 3899171-3899280 Caenorhabditis elegans
Exon46374   91   II: 3899324-3899414 Caenorhabditis elegans
Exon46377   509   II: 3899462-3899970 Caenorhabditis elegans
Exon46379   121   II: 3900015-3900135 Caenorhabditis elegans
Exon46381   106   II: 3900207-3900312 Caenorhabditis elegans
Exon46383   110   II: 3900361-3900470 Caenorhabditis elegans
Exon46385   88   II: 3900521-3900608 Caenorhabditis elegans
Exon46388   296   II: 3900658-3900953 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53C3.6a.1 3898142 3900953 1

1 Sequence

Length
1897

1 Sequence Ontology Term

Identifier Name Description
transcript