WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49D10.10.1 Sequence Name  C49D10.10.1
Length (nt)  1979   Chromosome Location  II: 3873511-3877227
Chromosome . Primary Identifier  II Chromosome Location . Start  3873511
Chromosome Location . End  3877227 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49D10.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016778 nep-3 C49D10.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49D10.10 C49D10.10 1905   II: 3873541-3873714

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49D10.10.1 3873511 3877227 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46317   204   II: 3873511-3873714 Caenorhabditis elegans
Exon46318   159   II: 3873764-3873922 Caenorhabditis elegans
Exon46319   251   II: 3874594-3874844 Caenorhabditis elegans
Exon46320   160   II: 3874892-3875051 Caenorhabditis elegans
Exon46321   255   II: 3875098-3875352 Caenorhabditis elegans
Exon46322   117   II: 3875398-3875514 Caenorhabditis elegans
Exon46323   102   II: 3876078-3876179 Caenorhabditis elegans
Exon46324   128   II: 3876237-3876364 Caenorhabditis elegans
Exon46325   109   II: 3876415-3876523 Caenorhabditis elegans
Exon46326   92   II: 3876593-3876684 Caenorhabditis elegans
Exon46327   136   II: 3876729-3876864 Caenorhabditis elegans
Exon46328   238   II: 3876916-3877153 Caenorhabditis elegans
Exon46329   28   II: 3877200-3877227 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49D10.10.1 3873511 3877227 -1

1 Sequence

Length
1979

1 Sequence Ontology Term

Identifier Name Description
transcript