WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17A2.1.1 Sequence Name  C17A2.1.1
Length (nt)  1032   Chromosome Location  II: 3852954-3854615
Chromosome . Primary Identifier  II Chromosome Location . Start  3852954
Chromosome Location . End  3854615 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17A2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015869 nhr-257 C17A2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17A2.1 C17A2.1 996   II: 3852990-3853005

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C17A2.1.1 3852954 3854615 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46263   52   II: 3852954-3853005 Caenorhabditis elegans
Exon46264   144   II: 3853158-3853301 Caenorhabditis elegans
Exon46265   66   II: 3853350-3853415 Caenorhabditis elegans
Exon46266   69   II: 3853464-3853532 Caenorhabditis elegans
Exon46267   143   II: 3853582-3853724 Caenorhabditis elegans
Exon46268   227   II: 3853902-3854128 Caenorhabditis elegans
Exon46269   202   II: 3854174-3854375 Caenorhabditis elegans
Exon46270   75   II: 3854442-3854516 Caenorhabditis elegans
Exon46271   54   II: 3854562-3854615 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C17A2.1.1 3852954 3854615 1

1 Sequence

Length
1032

1 Sequence Ontology Term

Identifier Name Description
transcript