WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17A2.2.1 Sequence Name  C17A2.2.1
Length (nt)  1379   Chromosome Location  II: 3846328-3848143
Chromosome . Primary Identifier  II Chromosome Location . Start  3846328
Chromosome Location . End  3848143 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17A2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015870 gtnt-9 C17A2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17A2.2 C17A2.2 1281   II: 3846328-3846528

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C17A2.2.1 3846328 3848143 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46246   201   II: 3846328-3846528 Caenorhabditis elegans
Exon46247   89   II: 3846577-3846665 Caenorhabditis elegans
Exon46248   185   II: 3846707-3846891 Caenorhabditis elegans
Exon46249   98   II: 3847038-3847135 Caenorhabditis elegans
Exon46250   153   II: 3847202-3847354 Caenorhabditis elegans
Exon46251   204   II: 3847404-3847607 Caenorhabditis elegans
Exon46252   185   II: 3847652-3847836 Caenorhabditis elegans
Exon46253   264   II: 3847880-3848143 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C17A2.2.1 3846328 3848143 1

1 Sequence

Length
1379

1 Sequence Ontology Term

Identifier Name Description
transcript