WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10G11.16c.1 Sequence Name  W10G11.16c.1
Length (nt)  2941   Chromosome Location  II: 3563429-3567346
Chromosome . Primary Identifier  II Chromosome Location . Start  3563429
Chromosome Location . End  3567346 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10G11.16c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021146 lgc-45 W10G11.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10G11.16c W10G11.16c 2718   II: 3563729-3563818

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10G11.16c.1 3563429 3567346 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon45506   92   II: 3563429-3563520 Caenorhabditis elegans
Exon45509   221   II: 3563598-3563818 Caenorhabditis elegans
Exon45512   162   II: 3563877-3564038 Caenorhabditis elegans
Exon45515   123   II: 3564082-3564204 Caenorhabditis elegans
Exon45518   201   II: 3564378-3564578 Caenorhabditis elegans
Exon45520   320   II: 3564625-3564944 Caenorhabditis elegans
Exon45524   262   II: 3564994-3565255 Caenorhabditis elegans
Exon45527   128   II: 3565306-3565433 Caenorhabditis elegans
Exon45530   164   II: 3565480-3565643 Caenorhabditis elegans
Exon45533   139   II: 3565695-3565833 Caenorhabditis elegans
Exon45536   148   II: 3565883-3566030 Caenorhabditis elegans
Exon45539   221   II: 3566074-3566294 Caenorhabditis elegans
Exon45542   83   II: 3566412-3566494 Caenorhabditis elegans
Exon45545   245   II: 3566562-3566806 Caenorhabditis elegans
Exon45548   126   II: 3566869-3566994 Caenorhabditis elegans
Exon45549   306   II: 3567041-3567346 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10G11.16c.1 3563429 3567346 1

1 Sequence

Length
2941

1 Sequence Ontology Term

Identifier Name Description
transcript