WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10G11.16a.1 Sequence Name  W10G11.16a.1
Length (nt)  3352   Chromosome Location  II: 3557476-3567579
Chromosome . Primary Identifier  II Chromosome Location . Start  3557476
Chromosome Location . End  3567579 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10G11.16a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021146 lgc-45 W10G11.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10G11.16a W10G11.16a 3105   II: 3557490-3557781

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10G11.16a.1 3557476 3567579 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon45493   306   II: 3557476-3557781 Caenorhabditis elegans
Exon45507   221   II: 3563598-3563818 Caenorhabditis elegans
Exon45510   162   II: 3563877-3564038 Caenorhabditis elegans
Exon45513   123   II: 3564082-3564204 Caenorhabditis elegans
Exon45516   201   II: 3564378-3564578 Caenorhabditis elegans
Exon45521   284   II: 3564661-3564944 Caenorhabditis elegans
Exon45522   262   II: 3564994-3565255 Caenorhabditis elegans
Exon45525   128   II: 3565306-3565433 Caenorhabditis elegans
Exon45528   164   II: 3565480-3565643 Caenorhabditis elegans
Exon45531   139   II: 3565695-3565833 Caenorhabditis elegans
Exon45534   148   II: 3565883-3566030 Caenorhabditis elegans
Exon45537   221   II: 3566074-3566294 Caenorhabditis elegans
Exon45540   83   II: 3566412-3566494 Caenorhabditis elegans
Exon45543   245   II: 3566562-3566806 Caenorhabditis elegans
Exon45546   126   II: 3566869-3566994 Caenorhabditis elegans
Exon45551   539   II: 3567041-3567579 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10G11.16a.1 3557476 3567579 1

1 Sequence

Length
3352

1 Sequence Ontology Term

Identifier Name Description
transcript