WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09G10.4a.1 Sequence Name  W09G10.4a.1
Length (nt)  4129   Chromosome Location  II: 3532527-3546431
Chromosome . Primary Identifier  II Chromosome Location . Start  3532527
Chromosome Location . End  3546431 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09G10.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000162 apd-3 W09G10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09G10.4a W09G10.4a 3756   II: 3532890-3532982

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09G10.4a.1 3532527 3546431 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon45446   456   II: 3532527-3532982 Caenorhabditis elegans
Exon45448   297   II: 3533515-3533811 Caenorhabditis elegans
Exon45450   126   II: 3534567-3534692 Caenorhabditis elegans
Exon45452   336   II: 3535050-3535385 Caenorhabditis elegans
Exon45454   390   II: 3537006-3537395 Caenorhabditis elegans
Exon45456   369   II: 3538336-3538704 Caenorhabditis elegans
Exon45458   661   II: 3540149-3540809 Caenorhabditis elegans
Exon45460   167   II: 3541102-3541268 Caenorhabditis elegans
Exon45462   461   II: 3542613-3543073 Caenorhabditis elegans
Exon45464   124   II: 3543742-3543865 Caenorhabditis elegans
Exon45466   367   II: 3544569-3544935 Caenorhabditis elegans
Exon45468   84   II: 3545761-3545844 Caenorhabditis elegans
Exon45469   89   II: 3545954-3546042 Caenorhabditis elegans
Exon45470   96   II: 3546179-3546274 Caenorhabditis elegans
Exon45471   106   II: 3546326-3546431 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09G10.4a.1 3532527 3546431 -1

1 Sequence

Length
4129

1 Sequence Ontology Term

Identifier Name Description
transcript