WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06D4.4.1 Sequence Name  T06D4.4.1
Length (nt)  2596   Chromosome Location  II: 3391996-3395584
Chromosome . Primary Identifier  II Chromosome Location . Start  3391996
Chromosome Location . End  3395584 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020293 nep-20 T06D4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D4.4 T06D4.4 2505   II: 3392036-3392209

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06D4.4.1 3391996 3395584 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon45042   214   II: 3391996-3392209 Caenorhabditis elegans
Exon45043   386   II: 3392256-3392641 Caenorhabditis elegans
Exon45044   157   II: 3392687-3392843 Caenorhabditis elegans
Exon45045   110   II: 3392885-3392994 Caenorhabditis elegans
Exon45046   151   II: 3393042-3393192 Caenorhabditis elegans
Exon45047   114   II: 3393657-3393770 Caenorhabditis elegans
Exon45048   276   II: 3393816-3394091 Caenorhabditis elegans
Exon45049   134   II: 3394137-3394270 Caenorhabditis elegans
Exon45050   97   II: 3394323-3394419 Caenorhabditis elegans
Exon45051   89   II: 3394468-3394556 Caenorhabditis elegans
Exon45052   136   II: 3394624-3394759 Caenorhabditis elegans
Exon45053   228   II: 3394807-3395034 Caenorhabditis elegans
Exon45054   504   II: 3395081-3395584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06D4.4.1 3391996 3395584 -1

1 Sequence

Length
2596

1 Sequence Ontology Term

Identifier Name Description
transcript