WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y25C1A.5.1 Sequence Name  Y25C1A.5.1
Length (nt)  3218   Chromosome Location  II: 3078796-3087682
Chromosome . Primary Identifier  II Chromosome Location . Start  3078796
Chromosome Location . End  3087682 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y25C1A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021292 copb-1 Y25C1A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y25C1A.5 Y25C1A.5 2916   II: 3078806-3079298

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y25C1A.5.1 3078796 3087682 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44255   503   II: 3078796-3079298 Caenorhabditis elegans
Exon44256   209   II: 3080388-3080596 Caenorhabditis elegans
Exon44257   83   II: 3081258-3081340 Caenorhabditis elegans
Exon44258   744   II: 3082242-3082985 Caenorhabditis elegans
Exon44259   979   II: 3083829-3084807 Caenorhabditis elegans
Exon44260   172   II: 3085519-3085690 Caenorhabditis elegans
Exon44261   528   II: 3087155-3087682 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y25C1A.5.1 3078796 3087682 1

1 Sequence

Length
3218

1 Sequence Ontology Term

Identifier Name Description
transcript