WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08A2.5a.1 Sequence Name  K08A2.5a.1
Length (nt)  2888   Chromosome Location  II: 2978416-2987023
Chromosome . Primary Identifier  II Chromosome Location . Start  2978416
Chromosome Location . End  2987023 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08A2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003678 nhr-88 K08A2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08A2.5a K08A2.5a 1782   II: 2978425-2978489

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K08A2.5a.1 2978416 2987023 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44051   74   II: 2978416-2978489 Caenorhabditis elegans
Exon44053   98   II: 2978905-2979002 Caenorhabditis elegans
Exon44058   455   II: 2979575-2980029 Caenorhabditis elegans
Exon44064   278   II: 2983203-2983480 Caenorhabditis elegans
Exon44067   196   II: 2983817-2984012 Caenorhabditis elegans
Exon44069   81   II: 2984524-2984604 Caenorhabditis elegans
Exon44071   105   II: 2985273-2985377 Caenorhabditis elegans
Exon44073   1601   II: 2985423-2987023 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K08A2.5a.1 2978416 2987023 1

1 Sequence

Length
2888

1 Sequence Ontology Term

Identifier Name Description
transcript