WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A8.4.1 Sequence Name  T05A8.4.1
Length (nt)  3482   Chromosome Location  II: 2716555-2725752
Chromosome . Primary Identifier  II Chromosome Location . Start  2716555
Chromosome Location . End  2725752 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020230 nep-2 T05A8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A8.4 T05A8.4 2211   II: 2717615-2717714

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05A8.4.1 2716555 2725752 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43527   1160   II: 2716555-2717714 Caenorhabditis elegans
Exon43529   174   II: 2719102-2719275 Caenorhabditis elegans
Exon43530   196   II: 2719598-2719793 Caenorhabditis elegans
Exon43531   120   II: 2720187-2720306 Caenorhabditis elegans
Exon43532   59   II: 2721209-2721267 Caenorhabditis elegans
Exon43533   98   II: 2721596-2721693 Caenorhabditis elegans
Exon43534   84   II: 2721744-2721827 Caenorhabditis elegans
Exon43535   99   II: 2721875-2721973 Caenorhabditis elegans
Exon43536   119   II: 2722397-2722515 Caenorhabditis elegans
Exon43537   208   II: 2722687-2722894 Caenorhabditis elegans
Exon43538   138   II: 2723351-2723488 Caenorhabditis elegans
Exon43539   88   II: 2723536-2723623 Caenorhabditis elegans
Exon43540   89   II: 2724000-2724088 Caenorhabditis elegans
Exon43541   89   II: 2724138-2724226 Caenorhabditis elegans
Exon43542   204   II: 2724380-2724583 Caenorhabditis elegans
Exon43543   162   II: 2724638-2724799 Caenorhabditis elegans
Exon43544   165   II: 2725121-2725285 Caenorhabditis elegans
Exon43545   230   II: 2725523-2725752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05A8.4.1 2716555 2725752 -1

1 Sequence

Length
3482

1 Sequence Ontology Term

Identifier Name Description
transcript