WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22E5.3.1 Sequence Name  F22E5.3.1
Length (nt)  3569   Chromosome Location  II: 2659664-2664686
Chromosome . Primary Identifier  II Chromosome Location . Start  2659664
Chromosome Location . End  2664686 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22E5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001546 gcy-21 F22E5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22E5.3 F22E5.3 3492   II: 2659670-2659823

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F22E5.3.1 2659664 2664686 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43398   160   II: 2659664-2659823 Caenorhabditis elegans
Exon43399   138   II: 2659869-2660006 Caenorhabditis elegans
Exon43400   185   II: 2660054-2660238 Caenorhabditis elegans
Exon43401   106   II: 2660283-2660388 Caenorhabditis elegans
Exon43402   102   II: 2660432-2660533 Caenorhabditis elegans
Exon43403   189   II: 2660578-2660766 Caenorhabditis elegans
Exon43404   179   II: 2661379-2661557 Caenorhabditis elegans
Exon43405   488   II: 2661601-2662088 Caenorhabditis elegans
Exon43406   142   II: 2662147-2662288 Caenorhabditis elegans
Exon43407   784   II: 2662331-2663114 Caenorhabditis elegans
Exon43408   187   II: 2663156-2663342 Caenorhabditis elegans
Exon43409   141   II: 2663385-2663525 Caenorhabditis elegans
Exon43410   124   II: 2663576-2663699 Caenorhabditis elegans
Exon43411   183   II: 2663754-2663936 Caenorhabditis elegans
Exon43412   93   II: 2663984-2664076 Caenorhabditis elegans
Exon43413   67   II: 2664121-2664187 Caenorhabditis elegans
Exon43414   301   II: 2664386-2664686 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F22E5.3.1 2659664 2664686 1

1 Sequence

Length
3569

1 Sequence Ontology Term

Identifier Name Description
transcript