WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09D1.1.1 Sequence Name  F09D1.1.1
Length (nt)  1933   Chromosome Location  II: 2565275-2575930
Chromosome . Primary Identifier  II Chromosome Location . Start  2565275
Chromosome Location . End  2575930 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09D1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017280 usp-39 F09D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09D1.1 F09D1.1 1809   II: 2565276-2565363

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09D1.1.1 2565275 2575930 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43221   89   II: 2565275-2565363 Caenorhabditis elegans
Exon43222   79   II: 2565416-2565494 Caenorhabditis elegans
Exon43223   67   II: 2565543-2565609 Caenorhabditis elegans
Exon43224   93   II: 2566990-2567082 Caenorhabditis elegans
Exon43225   104   II: 2567128-2567231 Caenorhabditis elegans
Exon43226   94   II: 2567282-2567375 Caenorhabditis elegans
Exon43227   192   II: 2568949-2569140 Caenorhabditis elegans
Exon43228   99   II: 2569957-2570055 Caenorhabditis elegans
Exon43229   314   II: 2571385-2571698 Caenorhabditis elegans
Exon43230   244   II: 2572397-2572640 Caenorhabditis elegans
Exon43231   282   II: 2573436-2573717 Caenorhabditis elegans
Exon43232   276   II: 2575655-2575930 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09D1.1.1 2565275 2575930 1

1 Sequence

Length
1933

1 Sequence Ontology Term

Identifier Name Description
transcript