Other
42 Allele
| Public Name |
|---|
| WBVar02124326 |
| WBVar02123182 |
| WBVar02121537 |
| gk964317 |
| gk963801 |
| WBVar02121124 |
| WBVar02121946 |
| WBVar02123007 |
| WBVar02122214 |
| WBVar02121362 |
| WBVar02123354 |
| WBVar02122298 |
| WBVar02124091 |
| WBVar02122908 |
| gk135991 |
| gk135992 |
| gk135993 |
| gk135994 |
| gk135995 |
| WBVar01764580 |
| WBVar02075821 |
| WBVar02078314 |
| WBVar01232800 |
| WBVar01232799 |
| WBVar02122527 |
| WBVar02120608 |
| WBVar02120779 |
| gk479784 |
| gk818476 |
| gk845991 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00023278 | 2408308 | 2409325 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrII_2409326..2409632 | 307 | II: 2409326-2409632 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Fungi infection: Haptoglossa zoospora. | Transcripts that showed significantly altered expression after L4 N2 animals were exposed to omycete Haptoglossa zoospora for 6 hours. | Kalisto abundance files were converted and analysed using Sleuth in a R pipeline. Standard Sleuth protocols were used to calculate differential expression. P value < 0.01 and FDR < 0.01. | WBPaper00062354:H.zoospora_6h_regulated |
| Down-regulated genes (fold change > 1.5) in two CoQ-deficient clk-1 mutant strains (e2519, qm30) compared to wild types N2. | Fold-changes of intensities were calculated from the arithmetic mean of gene expression values between experimental and corresponding control group. Fold change >= 1.5 was used as cut-off. | WBPaper00045774:clk-1_downregulated | |
| Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum | Transcripts that showed significantly increased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. | GFold3, logFC < -1 or > 1. | WBPaper00066703:L.plantarum-pdxH_upregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrII_2407682..2408307 | 626 | II: 2407682-2408307 | Caenorhabditis elegans |
