WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54A3.3.1 Sequence Name  F54A3.3.1
Length (nt)  2602   Chromosome Location  II: 2233540-2243539
Chromosome . Primary Identifier  II Chromosome Location . Start  2233540
Chromosome Location . End  2243539 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54A3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018782 cct-3 F54A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54A3.3 F54A3.3 1632   II: 2233549-2233647

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54A3.3.1 2233540 2243539 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42557   108   II: 2233540-2233647 Caenorhabditis elegans
Exon42558   110   II: 2233702-2233811 Caenorhabditis elegans
Exon42560   390   II: 2235463-2235852 Caenorhabditis elegans
Exon42561   169   II: 2236978-2237146 Caenorhabditis elegans
Exon42563   396   II: 2238114-2238509 Caenorhabditis elegans
Exon42564   306   II: 2240360-2240665 Caenorhabditis elegans
Exon42565   78   II: 2241652-2241729 Caenorhabditis elegans
Exon42566   1045   II: 2242495-2243539 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54A3.3.1 2233540 2243539 1

1 Sequence

Length
2602

1 Sequence Ontology Term

Identifier Name Description
transcript