WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54A3.6a.1 Sequence Name  F54A3.6a.1
Length (nt)  1651   Chromosome Location  II: 2225806-2232470
Chromosome . Primary Identifier  II Chromosome Location . Start  2225806
Chromosome Location . End  2232470 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54A3.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018785 F54A3.6 F54A3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54A3.6a F54A3.6a 1413   II: 2225905-2226024

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54A3.6a.1 2225806 2232470 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42516   219   II: 2225806-2226024 Caenorhabditis elegans
Exon42520   334   II: 2226938-2227271 Caenorhabditis elegans
Exon42525   248   II: 2229193-2229440 Caenorhabditis elegans
Exon42528   132   II: 2230411-2230542 Caenorhabditis elegans
Exon42532   90   II: 2230675-2230764 Caenorhabditis elegans
Exon42533   39   II: 2230829-2230867 Caenorhabditis elegans
Exon42536   69   II: 2231469-2231537 Caenorhabditis elegans
Exon42539   69   II: 2231693-2231761 Caenorhabditis elegans
Exon42542   70   II: 2231809-2231878 Caenorhabditis elegans
Exon42545   55   II: 2231922-2231976 Caenorhabditis elegans
Exon42548   136   II: 2232044-2232179 Caenorhabditis elegans
Exon42551   29   II: 2232229-2232257 Caenorhabditis elegans
Exon42556   161   II: 2232310-2232470 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54A3.6a.1 2225806 2232470 -1

1 Sequence

Length
1651

1 Sequence Ontology Term

Identifier Name Description
transcript