WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54A3.4.1 Sequence Name  F54A3.4.1
Length (nt)  2084   Chromosome Location  II: 2220396-2223567
Chromosome . Primary Identifier  II Chromosome Location . Start  2220396
Chromosome Location . End  2223567 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54A3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018783 cbs-2 F54A3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54A3.4 F54A3.4 1989   II: 2220464-2220512

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54A3.4.1 2220396 2223567 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42506   117   II: 2220396-2220512 Caenorhabditis elegans
Exon42508   392   II: 2220679-2221070 Caenorhabditis elegans
Exon42509   452   II: 2221115-2221566 Caenorhabditis elegans
Exon42510   107   II: 2221760-2221866 Caenorhabditis elegans
Exon42511   803   II: 2221911-2222713 Caenorhabditis elegans
Exon42512   68   II: 2223309-2223376 Caenorhabditis elegans
Exon42513   145   II: 2223423-2223567 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54A3.4.1 2220396 2223567 -1

1 Sequence

Length
2084

1 Sequence Ontology Term

Identifier Name Description
transcript