WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R52.9.1 Sequence Name  R52.9.1
Length (nt)  1650   Chromosome Location  II: 2116884-2122191
Chromosome . Primary Identifier  II Chromosome Location . Start  2116884
Chromosome Location . End  2122191 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R52.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020080 math-37 R52.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R52.9 R52.9 1248   II: 2117276-2117603

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R52.9.1 2116884 2122191 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42341   720   II: 2116884-2117603 Caenorhabditis elegans
Exon42342   115   II: 2117651-2117765 Caenorhabditis elegans
Exon42345   281   II: 2119831-2120111 Caenorhabditis elegans
Exon42346   124   II: 2120163-2120286 Caenorhabditis elegans
Exon42347   293   II: 2120764-2121056 Caenorhabditis elegans
Exon42348   117   II: 2122075-2122191 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R52.9.1 2116884 2122191 -1

1 Sequence

Length
1650

1 Sequence Ontology Term

Identifier Name Description
transcript