WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16A1.1.1 Sequence Name  T16A1.1.1
Length (nt)  2700   Chromosome Location  II: 2099926-2104180
Chromosome . Primary Identifier  II Chromosome Location . Start  2099926
Chromosome Location . End  2104180 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16A1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020532 math-42 T16A1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16A1.1 T16A1.1 2517   II: 2099935-2100041

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16A1.1.1 2099926 2104180 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42304   116   II: 2099926-2100041 Caenorhabditis elegans
Exon42305   299   II: 2100265-2100563 Caenorhabditis elegans
Exon42306   127   II: 2100609-2100735 Caenorhabditis elegans
Exon42307   281   II: 2100778-2101058 Caenorhabditis elegans
Exon42308   115   II: 2101104-2101218 Caenorhabditis elegans
Exon42309   360   II: 2101600-2101959 Caenorhabditis elegans
Exon42310   99   II: 2102008-2102106 Caenorhabditis elegans
Exon42311   278   II: 2102159-2102436 Caenorhabditis elegans
Exon42312   127   II: 2103021-2103147 Caenorhabditis elegans
Exon42313   278   II: 2103192-2103469 Caenorhabditis elegans
Exon42314   112   II: 2103517-2103628 Caenorhabditis elegans
Exon42315   508   II: 2103673-2104180 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16A1.1.1 2099926 2104180 1

1 Sequence

Length
2700

1 Sequence Ontology Term

Identifier Name Description
transcript