WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16A1.7.1 Sequence Name  T16A1.7.1
Length (nt)  3090   Chromosome Location  II: 2085249-2090636
Chromosome . Primary Identifier  II Chromosome Location . Start  2085249
Chromosome Location . End  2090636 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16A1.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004149 trpl-5 T16A1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16A1.7 T16A1.7 1506   II: 2086911-2087023

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16A1.7.1 2085249 2090636 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42282   1342   II: 2085249-2086590 Caenorhabditis elegans
Exon42283   72   II: 2086640-2086711 Caenorhabditis elegans
Exon42284   265   II: 2086759-2087023 Caenorhabditis elegans
Exon42285   79   II: 2087072-2087150 Caenorhabditis elegans
Exon42286   327   II: 2087616-2087942 Caenorhabditis elegans
Exon42287   177   II: 2088330-2088506 Caenorhabditis elegans
Exon42288   84   II: 2088552-2088635 Caenorhabditis elegans
Exon42289   241   II: 2088825-2089065 Caenorhabditis elegans
Exon42290   147   II: 2089792-2089938 Caenorhabditis elegans
Exon42291   100   II: 2089985-2090084 Caenorhabditis elegans
Exon42292   94   II: 2090138-2090231 Caenorhabditis elegans
Exon42293   162   II: 2090475-2090636 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16A1.7.1 2085249 2090636 -1

1 Sequence

Length
3090

1 Sequence Ontology Term

Identifier Name Description
transcript