WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C40D2.2.1 Sequence Name  C40D2.2.1
Length (nt)  1389   Chromosome Location  II: 1996537-1998531
Chromosome . Primary Identifier  II Chromosome Location . Start  1996537
Chromosome Location . End  1998531 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C40D2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016555 math-20 C40D2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C40D2.2 C40D2.2 1311   II: 1996556-1996662

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C40D2.2.1 1996537 1998531 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42086   126   II: 1996537-1996662 Caenorhabditis elegans
Exon42087   299   II: 1996726-1997024 Caenorhabditis elegans
Exon42088   127   II: 1997068-1997194 Caenorhabditis elegans
Exon42089   275   II: 1997246-1997520 Caenorhabditis elegans
Exon42090   115   II: 1997567-1997681 Caenorhabditis elegans
Exon42091   447   II: 1998085-1998531 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C40D2.2.1 1996537 1998531 1

1 Sequence

Length
1389

1 Sequence Ontology Term

Identifier Name Description
transcript