WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00165213 Gene Name  21ur-15590
Sequence Name  ? ZK250.11 Organism  Caenorhabditis elegans
Automated Description  Is affected by ilc-17.1 based on RNA-seq studies. Biotype  SO:0001638
Genetic Position  II :-14.1049± Length (nt)  ? 21
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00165213

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK250.11 ZK250.11 21   II: 1945379-1945399
 

Other

0 CDSs

0 RNAi Result

23 Allele

Public Name
WBVar02124326
WBVar02123182
WBVar02121537
gk964317
gk963801
WBVar02122524
WBVar02120604
WBVar02121124
WBVar02124543
WBVar02120776
WBVar02121946
WBVar02122773
WBVar02123007
WBVar02122097
WBVar02122433
WBVar02079843
WBVar02079710
WBVar02079709
WBVar01412761
WBVar02079708
WBVar02079650
gk691129
gk691130

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00165213 1945379 1945399 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrII_1945194..1945378   185 II: 1945194-1945378 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage. DESeq2, fold change > 2, FDR < 0.05. WBPaper00066594:ilc-17.1(syb5296)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00165213 1945379 1945399 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
21

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrII_1945400..1945437   38 II: 1945400-1945437 Caenorhabditis elegans