WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08F1.4a.1 Sequence Name  C08F1.4a.1
Length (nt)  2248   Chromosome Location  II: 1772085-1778542
Chromosome . Primary Identifier  II Chromosome Location . Start  1772085
Chromosome Location . End  1778542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08F1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015608 math-3 C08F1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08F1.4a C08F1.4a 1563   II: 1776310-1776409

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C08F1.4a.1 1772085 1778542 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41659   20   II: 1772085-1772104 Caenorhabditis elegans
Exon41676   474   II: 1775936-1776409 Caenorhabditis elegans
Exon41680   133   II: 1776451-1776583 Caenorhabditis elegans
Exon41684   342   II: 1776627-1776968 Caenorhabditis elegans
Exon41688   99   II: 1777014-1777112 Caenorhabditis elegans
Exon41692   281   II: 1777168-1777448 Caenorhabditis elegans
Exon41696   127   II: 1777508-1777634 Caenorhabditis elegans
Exon41700   278   II: 1777681-1777958 Caenorhabditis elegans
Exon41704   112   II: 1778008-1778119 Caenorhabditis elegans
Exon41709   382   II: 1778161-1778542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C08F1.4a.1 1772085 1778542 1

1 Sequence

Length
2248

1 Sequence Ontology Term

Identifier Name Description
transcript